CDS

Accession Number TCMCG015C14897
gbkey CDS
Protein Id XP_027112419.1
Location join(15496241..15496605,15497832..15497949,15498025..15498199,15498603..15498792,15499044..15499161,15499229..15499403,15499675..15499849,15500908..15501025,15504160..15504216,15504487..15504621)
Gene LOC113731376
GeneID 113731376
Organism Coffea arabica

Protein

Length 541aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027256618.1
Definition DNA ligase 1-like isoform X6 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description Upstream activation factor subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15223        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000120        [VIEW IN EMBL-EBI]
GO:0000500        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006356        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045943        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTTCGGAGTCGGAGCTAGTCAATCGGCTCAGGGAAATCCTTCGAACCTCCGACCTGGACATTGCCACCGCTGGCTCCGTTCGCCGCCAACTCGAGGAGGAATTCGGGGTTAGTCTGCATGACAGGAAAACCTTCATAAGCGAGCAAATTGACTTGTTCCTCTCAGAACTTAGAAACGATGACGCCCAACAGCAACATCGAGAAGAAACCCAGGGAGATAGCAGTGATGATGAGGAGATAAGGCAAGTAAAGGTTGAGGATGTGAAGCAAGTTGATGAGAATGAGGATAGTGGGTCCCACACCCAGGAAGTGGCAATTGGAAAAGATGAAGGAAGTGATGGAGTAAGAAGCAAGCAAAAAAGTAGGTCTCACAAGAAGGATAAAAATGAAAAGAAAAAGGGAAGTGGCTTTGGCAAAACATGGGCAATATCTCCTCAACTTCAGGAAATTGTTGGAGTGCCAGAAATGGCTAGAACTGAGGTGGTAAAAAGGATGTGGACATACATCAGGGAGAATAATTTGCAAAATCCAAAGGATAAGCGAAAGATAATATGTGATGAAAACTTGCGTGGAATTTTTCAAGTAAAGAGTATTAACATGTTTCAGATGAATAAAGCTCTGTCCAAGCACATGTGGCCCATTGATTCAGAAGATGAACCCCAGAAGCACAACACACAACAGCATCAAGAAGATCAAGAAGAAGCGGAAGAAGAAGATAGTAATGGTGAAGAGATGAAACAAGAATTTGAGAATCTGAAGCAAGAACTGAATGAGGGTAGTGTTCACCAGGAAGTGGACGTTGAAAATGAGGAAGAAAGTCATGGAGTGAGAAGCAAGAAGAGAAGTAGGTCTTACAAGATGGATAACAATGATAAGAAAAAGAGAAGCGGCTTTAACAAACCATGGGCAATTTCTCCTCAACTTCAGAAAATTGTTGGAGTGCAGCAGATGGCTAGAACTGAGGTTGTCAAAAAGATGTGGGTGTACATTCGCGAGAAGAATTTGCAAAATCCGAAGGATAAGCGAAAGATAATATGTGATCAAACCTTGCATGGAATTTTTCAGGTCAAGAATATTAACATGTTTCAGATGAATAAAGCACTGTCAAAGCACATGTGGCCCATTGATGCAGAAGATGATCACCAAGAAGCTGAAGAAGACGGTAATGGTGAAGAGACAGAAGAACAATCAGAGGATGTGAAGCAAGAAGAGAATGAGTACAGTGGGTCCAATGAAGTGGACATAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGATGGAATAAGAAATAAGCAAAAAAGTAGGTCTCAAAGGATGGATGCAATTCAAAATAAAAAAGGAAGTGGCTTTAGCAAACCATGTGCCATATCTCCCCAACTTCAGGAACTTGTTGGAGTGCCTGAGATGGCTAGAACCGAGCAACTCCTATCAAATCTTCACAGAAGAAAAGGCAGCGGGAAAAGGACCGGCAATAAGGTTTTGATGAACCAAAATGAAAAGAAAAACAGCAGAAAGGGTGAATGTCGGGTTGCCTTGGCCCCCTTTTCTTGTCAGGTATTGTGGTCAAGTTCCTTGGTACTGGTGAATATGCGCTATCTCGAGTTGATGTAG
Protein:  
MVSESELVNRLREILRTSDLDIATAGSVRRQLEEEFGVSLHDRKTFISEQIDLFLSELRNDDAQQQHREETQGDSSDDEEIRQVKVEDVKQVDENEDSGSHTQEVAIGKDEGSDGVRSKQKSRSHKKDKNEKKKGSGFGKTWAISPQLQEIVGVPEMARTEVVKRMWTYIRENNLQNPKDKRKIICDENLRGIFQVKSINMFQMNKALSKHMWPIDSEDEPQKHNTQQHQEDQEEAEEEDSNGEEMKQEFENLKQELNEGSVHQEVDVENEEESHGVRSKKRSRSYKMDNNDKKKRSGFNKPWAISPQLQKIVGVQQMARTEVVKKMWVYIREKNLQNPKDKRKIICDQTLHGIFQVKNINMFQMNKALSKHMWPIDAEDDHQEAEEDGNGEETEEQSEDVKQEENEYSGSNEVDIGGGGEEEEEEEEESDGIRNKQKSRSQRMDAIQNKKGSGFSKPCAISPQLQELVGVPEMARTEQLLSNLHRRKGSGKRTGNKVLMNQNEKKNSRKGECRVALAPFSCQVLWSSSLVLVNMRYLELM